Package Bio :: Package MEME
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Source Code for Package Bio.MEME

 1  # Copyright 2005 by Jason A. Hackney.  All rights reserved. 
 2  # This code is part of the Biopython distribution and governed by its 
 3  # license.  Please see the LICENSE file that should have been included 
 4  # as part of this package. 
 5  """ 
 6  Parser for dealing with text output from the MEME motif search program (DEPRECATED). 
 7   
 8  Now superseded by Bio.Motif 
 9   
10  Class mapping: 
11  Bio.MEME.Motif.MEMEMotif -> Bio.Motif.Motif 
12  Bio.MEME.parser.MEMEParser -> Bio.Motif.MEMEParser 
13  Bio.MEME.parser.MASTParser -> Bio.Motif.MASTParser 
14   
15  Instead of using Bio.MEME.parser.MEMEParser class, you can use 
16  Bio.Motif.parse(handle,format="MEME") 
17   
18  """ 
19   
20  import warnings 
21  warnings.warn('Bio.MEME is deprecated. Please use Bio.Motif instead.', 
22                DeprecationWarning) 
23