Class MEMEParser
source code
ParserSupport.AbstractParser --+
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MEMEParser
A parser for the text output of the MEME program (OBSOLETE).
Parses the output into an object of the MEMERecord class.
Methods:
parse (handle): parses the contents of the file handle passed to it.
Example:
f = open("meme.output.txt")
parser = MEMEParser()
meme_record = parser.parse(f)
for motif in meme_record.motifs:
for instance in motif.instances:
print instance.motif_name, instance.sequence_name, instance.strand, instance.pvalue
This class is OBSOLETE; its functionality is now available through
Bio.Motif.Parsers.MEME.