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Identifier Index
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]
C
C
(in
Bio.Nexus.Nexus
)
charac
(in
NdeI
)
compsite
(in
BsrI
)
c_
(in
Bio.Affy.CelFile
)
charac
(in
NdeII
)
compsite
(in
BsrSI
)
ca_depth()
(in
Bio.PDB.ResidueDepth'
)
charac
(in
NgoAVIII
)
compsite
(in
BssAI
)
Cac8I
charac
(in
NgoMIV
)
compsite
(in
BssECI
)
Cache
(in
Bio.PopGen.SimCoal
)
charac
(in
NhaXI
)
compsite
(in
BssHII
)
cai_for_gene()
(in
CodonAdaptationIndex
)
charac
(in
NheI
)
compsite
(in
BssKI
)
CaiI
charac
(in
NlaCI
)
compsite
(in
BssMI
)
calc_affine_penalty()
(in
Bio.pairwise2
)
charac
(in
NlaIII
)
compsite
(in
BssNAI
)
calc_allele_genotype_freqs()
(in
GenePopController
)
charac
(in
NlaIV
)
compsite
(in
BssNI
)
calc_angle()
(in
Bio.PDB.Vector'
)
charac
(in
Nli3877I
)
compsite
(in
BssSI
)
calc_dihedral()
(in
Bio.PDB.Vector'
)
charac
(in
NmeAIII
)
compsite
(in
BssT1I
)
calc_diversities_fis_with_identity()
(in
GenePopController
)
charac
(in
NmeDI
)
compsite
(in
Bst1107I
)
calc_diversities_fis_with_size()
(in
GenePopController
)
charac
(in
NmuCI
)
compsite
(in
Bst2BI
)
calc_fst_all()
(in
GenePopController
)
charac
(in
NotI
)
compsite
(in
Bst2UI
)
calc_fst_pair()
(in
GenePopController
)
charac
(in
NruI
)
compsite
(in
Bst4CI
)
calc_ibd()
(in
EasyController
)
charac
(in
NsbI
)
compsite
(in
Bst6I
)
calc_ibd_diplo()
(in
GenePopController
)
charac
(in
NsiI
)
compsite
(in
Bst98I
)
calc_ibd_haplo()
(in
GenePopController
)
charac
(in
NspBII
)
compsite
(in
BstACI
)
calc_rho_all()
(in
GenePopController
)
charac
(in
NspI
)
compsite
(in
BstAFI
)
calc_rho_pair()
(in
GenePopController
)
charac
(in
NspV
)
compsite
(in
BstAPI
)
calculate()
(in
Bio.LogisticRegression
)
charac
(in
OliI
)
compsite
(in
BstAUI
)
calculate()
(in
Bio.MaxEntropy
)
charac
(in
PabI
)
compsite
(in
BstBAI
)
calculate()
(in
Bio.NaiveBayes
)
charac
(in
PacI
)
compsite
(in
BstBI
)
calculate()
(in
Bio.kNN
)
charac
(in
PaeI
)
compsite
(in
BstC8I
)
calculate_fitness()
(in
DifferentialSchemaFitness
)
charac
(in
PaeR7I
)
compsite
(in
BstDEI
)
calculate_fitness()
(in
MostCountSchemaFitness
)
charac
(in
PagI
)
compsite
(in
BstDSI
)
calculate_relative_entropy()
(in
LogOddsMatrix
)
charac
(in
PalAI
)
compsite
(in
BstEII
)
calculate_relative_entropy()
(in
SubstitutionMatrix
)
charac
(in
PasI
)
compsite
(in
BstENI
)
canvas_angle()
(in
CircularDrawer
)
charac
(in
PauI
)
compsite
(in
BstF5I
)
canvas_location()
(in
LinearDrawer
)
charac
(in
PceI
)
compsite
(in
BstFNI
)
CaPPBuilder
(in
Bio.PDB.Polypeptide
)
charac
(in
PciI
)
compsite
(in
BstH2I
)
CAPS
(in
Bio
)
charac
(in
PciSI
)
compsite
(in
BstHHI
)
CAPSMap
(in
Bio.CAPS
)
charac
(in
PctI
)
compsite
(in
BstKTI
)
cartesian()
(in
HashSet
)
charac
(in
PdiI
)
compsite
(in
BstMAI
)
cast
(in
Bio.Affy.CelFile
)
charac
(in
PdmI
)
compsite
(in
BstMBI
)
catalyse()
(in
Blunt
)
charac
(in
PfeI
)
compsite
(in
BstMCI
)
catalyse()
(in
Ov3
)
charac
(in
Pfl1108I
)
compsite
(in
BstMWI
)
catalyse()
(in
Ov5
)
charac
(in
Pfl23II
)
compsite
(in
BstNI
)
catalyse()
(in
Unknown
)
charac
(in
PflFI
)
compsite
(in
BstNSI
)
catalytic_activity()
(in
_RecordConsumer
)
charac
(in
PflMI
)
compsite
(in
BstOI
)
CauII
charac
(in
PfoI
)
compsite
(in
BstPAI
)
CciI
charac
(in
PhoI
)
compsite
(in
BstPI
)
CciNI
charac
(in
PinAI
)
compsite
(in
BstSCI
)
CdiI
charac
(in
PlaDI
)
compsite
(in
BstSFI
)
CdpI
charac
(in
Ple19I
)
compsite
(in
BstSLI
)
ceil
(in
Bio.Affy.CelFile
)
charac
(in
PleI
)
compsite
(in
BstSNI
)
CelConsumer
(in
Bio.Affy.CelFile
)
charac
(in
PmaCI
)
compsite
(in
BstUI
)
CelFile
(in
Bio.Affy
)
charac
(in
PmeI
)
compsite
(in
BstV1I
)
CelII
charac
(in
PmlI
)
compsite
(in
BstV2I
)
CelParser
(in
Bio.Affy.CelFile
)
charac
(in
PpiI
)
compsite
(in
BstX2I
)
CelRecord
(in
Bio.Affy.CelFile
)
charac
(in
PpsI
)
compsite
(in
BstXI
)
CelScanner
(in
Bio.Affy.CelFile
)
charac
(in
Ppu10I
)
compsite
(in
BstYI
)
centre
(in
GraphData
)
charac
(in
Ppu21I
)
compsite
(in
BstZ17I
)
CfoI
charac
(in
PpuMI
)
compsite
(in
BstZI
)
Cfr10I
charac
(in
PscI
)
compsite
(in
Bsu15I
)
Cfr13I
charac
(in
PshAI
)
compsite
(in
Bsu36I
)
Cfr42I
charac
(in
PshBI
)
compsite
(in
BsuRI
)
Cfr9I
charac
(in
PsiI
)
compsite
(in
BsuTUI
)
CfrI
charac
(in
Psp03I
)
compsite
(in
BtgI
)
ChaI
charac
(in
Psp124BI
)
compsite
(in
BtgZI
)
Chain
(in
Bio.Crystal
)
charac
(in
Psp1406I
)
compsite
(in
BthCI
)
Chain
(in
Bio.Nexus.Nodes
)
charac
(in
Psp5II
)
compsite
(in
BtrI
)
Chain
(in
Bio.PDB
)
charac
(in
Psp6I
)
compsite
(in
BtsCI
)
Chain
(in
Bio.PDB.Chain
)
charac
(in
PspCI
)
compsite
(in
BtsI
)
chain_id
(in
align
)
charac
(in
PspEI
)
compsite
(in
BtuMI
)
ChainException
(in
Bio.Nexus.Nodes
)
charac
(in
PspGI
)
compsite
(in
BveI
)
ChainSelector
(in
Bio.PDB.Dice
)
charac
(in
PspLI
)
compsite
(in
Cac8I
)
change()
(in
Analysis
)
charac
(in
PspN4I
)
compsite
(in
CaiI
)
charac
(in
AanI
)
charac
(in
PspOMI
)
compsite
(in
CauII
)
charac
(in
AarI
)
charac
(in
PspOMII
)
compsite
(in
CciI
)
charac
(in
AasI
)
charac
(in
PspPI
)
compsite
(in
CciNI
)
charac
(in
AatI
)
charac
(in
PspPPI
)
compsite
(in
CdiI
)
charac
(in
AatII
)
charac
(in
PspPRI
)
compsite
(in
CdpI
)
charac
(in
AbsI
)
charac
(in
PspXI
)
compsite
(in
CelII
)
charac
(in
Acc16I
)
charac
(in
PsrI
)
compsite
(in
CfoI
)
charac
(in
Acc36I
)
charac
(in
PssI
)
compsite
(in
Cfr10I
)
charac
(in
Acc65I
)
charac
(in
PstI
)
compsite
(in
Cfr13I
)
charac
(in
AccB1I
)
charac
(in
PsuI
)
compsite
(in
Cfr42I
)
charac
(in
AccB7I
)
charac
(in
PsyI
)
compsite
(in
Cfr9I
)
charac
(in
AccBSI
)
charac
(in
PteI
)
compsite
(in
CfrI
)
charac
(in
AccI
)
charac
(in
PvuI
)
compsite
(in
ChaI
)
charac
(in
AccII
)
charac
(in
PvuII
)
compsite
(in
CjeI
)
charac
(in
AccIII
)
charac
(in
RcaI
)
compsite
(in
CjeNII
)
charac
(in
AceIII
)
charac
(in
RceI
)
compsite
(in
CjePI
)
charac
(in
AciI
)
charac
(in
RgaI
)
compsite
(in
CjuI
)
charac
(in
AclI
)
charac
(in
RigI
)
compsite
(in
CjuII
)
charac
(in
AclWI
)
charac
(in
RleAI
)
compsite
(in
ClaI
)
charac
(in
AcoI
)
charac
(in
RpaB5I
)
compsite
(in
CpoI
)
charac
(in
AcsI
)
charac
(in
RruI
)
compsite
(in
CseI
)
charac
(in
AcuI
)
charac
(in
RsaI
)
compsite
(in
CsiI
)
charac
(in
AcvI
)
charac
(in
RsaNI
)
compsite
(in
Csp45I
)
charac
(in
AcyI
)
charac
(in
RseI
)
compsite
(in
Csp6I
)
charac
(in
AdeI
)
charac
(in
Rsr2I
)
compsite
(in
CspAI
)
charac
(in
AfaI
)
charac
(in
RsrII
)
compsite
(in
CspCI
)
charac
(in
AfeI
)
charac
(in
SacI
)
compsite
(in
CspI
)
charac
(in
AfiI
)
charac
(in
SacII
)
compsite
(in
CstMI
)
charac
(in
AflII
)
charac
(in
SalI
)
compsite
(in
CviAII
)
charac
(in
AflIII
)
charac
(in
SanDI
)
compsite
(in
CviJI
)
charac
(in
AgeI
)
charac
(in
SapI
)
compsite
(in
CviKI_1
)
charac
(in
AgsI
)
charac
(in
SaqAI
)
compsite
(in
CviQI
)
charac
(in
AhaIII
)
charac
(in
SatI
)
compsite
(in
CviRI
)
charac
(in
AhdI
)
charac
(in
Sau3AI
)
compsite
(in
DdeI
)
charac
(in
AhlI
)
charac
(in
Sau96I
)
compsite
(in
DinI
)
charac
(in
AjiI
)
charac
(in
SauI
)
compsite
(in
DpnI
)
charac
(in
AjnI
)
charac
(in
SbfI
)
compsite
(in
DpnII
)
charac
(in
AjuI
)
charac
(in
ScaI
)
compsite
(in
DraI
)
charac
(in
AleI
)
charac
(in
SchI
)
compsite
(in
DraII
)
charac
(in
AlfI
)
charac
(in
SciI
)
compsite
(in
DraIII
)
charac
(in
AloI
)
charac
(in
ScrFI
)
compsite
(in
DraRI
)
charac
(in
AluBI
)
charac
(in
SdaI
)
compsite
(in
DrdI
)
charac
(in
AluI
)
charac
(in
SdeAI
)
compsite
(in
DrdII
)
charac
(in
Alw21I
)
charac
(in
SdeOSI
)
compsite
(in
DrdIV
)
charac
(in
Alw26I
)
charac
(in
SduI
)
compsite
(in
DriI
)
charac
(in
Alw44I
)
charac
(in
SecI
)
compsite
(in
DsaI
)
charac
(in
AlwFI
)
charac
(in
SelI
)
compsite
(in
DseDI
)
charac
(in
AlwI
)
charac
(in
SetI
)
compsite
(in
EaeI
)
charac
(in
AlwNI
)
charac
(in
SexAI
)
compsite
(in
EagI
)
charac
(in
Ama87I
)
charac
(in
SfaAI
)
compsite
(in
Eam1104I
)
charac
(in
Aor13HI
)
charac
(in
SfaNI
)
compsite
(in
Eam1105I
)
charac
(in
Aor51HI
)
charac
(in
SfcI
)
compsite
(in
EarI
)
charac
(in
ApaBI
)
charac
(in
SfeI
)
compsite
(in
EciI
)
charac
(in
ApaI
)
charac
(in
SfiI
)
compsite
(in
Ecl136II
)
charac
(in
ApaLI
)
charac
(in
SfoI
)
compsite
(in
EclXI
)
charac
(in
ApeKI
)
charac
(in
Sfr274I
)
compsite
(in
Eco105I
)
charac
(in
ApoI
)
charac
(in
Sfr303I
)
compsite
(in
Eco130I
)
charac
(in
ApyPI
)
charac
(in
SfuI
)
compsite
(in
Eco147I
)
charac
(in
AquII
)
charac
(in
SgfI
)
compsite
(in
Eco24I
)
charac
(in
AquIII
)
charac
(in
SgrAI
)
compsite
(in
Eco31I
)
charac
(in
AquIV
)
charac
(in
SgrBI
)
compsite
(in
Eco32I
)
charac
(in
ArsI
)
charac
(in
SgrDI
)
compsite
(in
Eco47I
)
charac
(in
AscI
)
charac
(in
SgsI
)
compsite
(in
Eco47III
)
charac
(in
AseI
)
charac
(in
SimI
)
compsite
(in
Eco52I
)
charac
(in
Asi256I
)
charac
(in
SinI
)
compsite
(in
Eco53kI
)
charac
(in
AsiGI
)
charac
(in
SlaI
)
compsite
(in
Eco57I
)
charac
(in
AsiSI
)
charac
(in
SmaI
)
compsite
(in
Eco57MI
)
charac
(in
Asp700I
)
charac
(in
SmiI
)
compsite
(in
Eco72I
)
charac
(in
Asp718I
)
charac
(in
SmiMI
)
compsite
(in
Eco81I
)
charac
(in
AspA2I
)
charac
(in
SmlI
)
compsite
(in
Eco88I
)
charac
(in
AspCNI
)
charac
(in
SmoI
)
compsite
(in
Eco91I
)
charac
(in
AspEI
)
charac
(in
SmuI
)
compsite
(in
EcoHI
)
charac
(in
AspI
)
charac
(in
SnaBI
)
compsite
(in
EcoICRI
)
charac
(in
AspLEI
)
charac
(in
SnaI
)
compsite
(in
EcoNI
)
charac
(in
AspS9I
)
charac
(in
SpeI
)
compsite
(in
EcoO109I
)
charac
(in
AssI
)
charac
(in
SphI
)
compsite
(in
EcoO65I
)
charac
(in
AsuC2I
)
charac
(in
SplI
)
compsite
(in
EcoRI
)
charac
(in
AsuHPI
)
charac
(in
SpoDI
)
compsite
(in
EcoRII
)
charac
(in
AsuI
)
charac
(in
SrfI
)
compsite
(in
EcoRV
)
charac
(in
AsuII
)
charac
(in
Sse232I
)
compsite
(in
EcoT14I
)
charac
(in
AsuNHI
)
charac
(in
Sse8387I
)
compsite
(in
EcoT22I
)
charac
(in
AvaI
)
charac
(in
Sse8647I
)
compsite
(in
EcoT38I
)
charac
(in
AvaII
)
charac
(in
Sse9I
)
compsite
(in
EgeI
)
charac
(in
AvaIII
)
charac
(in
SseBI
)
compsite
(in
EheI
)
charac
(in
AviII
)
charac
(in
SsiI
)
compsite
(in
ErhI
)
charac
(in
AvrII
)
charac
(in
SspD5I
)
compsite
(in
EsaBC3I
)
charac
(in
AxyI
)
charac
(in
SspDI
)
compsite
(in
EsaSSI
)
charac
(in
BaeGI
)
charac
(in
SspI
)
compsite
(in
Esp3I
)
charac
(in
BaeI
)
charac
(in
SstI
)
compsite
(in
EspI
)
charac
(in
BalI
)
charac
(in
SstII
)
compsite
(in
FaeI
)
charac
(in
BamHI
)
charac
(in
Sth132I
)
compsite
(in
FaiI
)
charac
(in
BanI
)
charac
(in
Sth302II
)
compsite
(in
FalI
)
charac
(in
BanII
)
charac
(in
StrI
)
compsite
(in
FaqI
)
charac
(in
BanIII
)
charac
(in
StsI
)
compsite
(in
FatI
)
charac
(in
BarI
)
charac
(in
StuI
)
compsite
(in
FauI
)
charac
(in
BasI
)
charac
(in
StyD4I
)
compsite
(in
FauNDI
)
charac
(in
BauI
)
charac
(in
StyI
)
compsite
(in
FbaI
)
charac
(in
BbeI
)
charac
(in
SwaI
)
compsite
(in
FblI
)
charac
(in
Bbr7I
)
charac
(in
TaaI
)
compsite
(in
FinI
)
charac
(in
BbrPI
)
charac
(in
TaiI
)
compsite
(in
FmuI
)
charac
(in
BbsI
)
charac
(in
TaqI
)
compsite
(in
Fnu4HI
)
charac
(in
BbuI
)
charac
(in
TaqII
)
compsite
(in
FnuDII
)
charac
(in
Bbv12I
)
charac
(in
TatI
)
compsite
(in
FokI
)
charac
(in
BbvCI
)
charac
(in
TauI
)
compsite
(in
FriOI
)
charac
(in
BbvI
)
charac
(in
TfiI
)
compsite
(in
FseI
)
charac
(in
BbvII
)
charac
(in
TliI
)
compsite
(in
Fsp4HI
)
charac
(in
BccI
)
charac
(in
Tru1I
)
compsite
(in
FspAI
)
charac
(in
Bce83I
)
charac
(in
Tru9I
)
compsite
(in
FspBI
)
charac
(in
BceAI
)
charac
(in
TscAI
)
compsite
(in
FspI
)
charac
(in
BcefI
)
charac
(in
TseI
)
compsite
(in
GdiII
)
charac
(in
BcgI
)
charac
(in
TsoI
)
compsite
(in
GlaI
)
charac
(in
BciVI
)
charac
(in
Tsp45I
)
compsite
(in
GluI
)
charac
(in
BclI
)
charac
(in
Tsp4CI
)
compsite
(in
GsaI
)
charac
(in
BcnI
)
charac
(in
Tsp509I
)
compsite
(in
GsuI
)
charac
(in
BcuI
)
charac
(in
TspDTI
)
compsite
(in
HaeI
)
charac
(in
BdaI
)
charac
(in
TspEI
)
compsite
(in
HaeII
)
charac
(in
BetI
)
charac
(in
TspGWI
)
compsite
(in
HaeIII
)
charac
(in
BfaI
)
charac
(in
TspMI
)
compsite
(in
HapII
)
charac
(in
BfiI
)
charac
(in
TspRI
)
compsite
(in
HgaI
)
charac
(in
BfmI
)
charac
(in
TssI
)
compsite
(in
HgiAI
)
charac
(in
BfoI
)
charac
(in
TstI
)
compsite
(in
HgiCI
)
charac
(in
BfrI
)
charac
(in
TsuI
)
compsite
(in
HgiEII
)
charac
(in
BfuAI
)
charac
(in
Tth111I
)
compsite
(in
HgiJII
)
charac
(in
BfuCI
)
charac
(in
Tth111II
)
compsite
(in
HhaI
)
charac
(in
BfuI
)
charac
(in
UbaF11I
)
compsite
(in
Hin1I
)
charac
(in
BglI
)
charac
(in
UbaF12I
)
compsite
(in
Hin1II
)
charac
(in
BglII
)
charac
(in
UbaF13I
)
compsite
(in
Hin4I
)
charac
(in
BinI
)
charac
(in
UbaF14I
)
compsite
(in
Hin4II
)
charac
(in
BisI
)
charac
(in
UbaF9I
)
compsite
(in
Hin6I
)
charac
(in
BlnI
)
charac
(in
UbaPI
)
compsite
(in
HinP1I
)
charac
(in
BlpI
)
charac
(in
UnbI
)
compsite
(in
HincII
)
charac
(in
BlsI
)
charac
(in
Van91I
)
compsite
(in
HindII
)
charac
(in
BmcAI
)
charac
(in
Vha464I
)
compsite
(in
HindIII
)
charac
(in
Bme1390I
)
charac
(in
VneI
)
compsite
(in
HinfI
)
charac
(in
Bme18I
)
charac
(in
VpaK11AI
)
compsite
(in
HpaI
)
charac
(in
BmeRI
)
charac
(in
VpaK11BI
)
compsite
(in
HpaII
)
charac
(in
BmeT110I
)
charac
(in
VspI
)
compsite
(in
HphI
)
charac
(in
BmgBI
)
charac
(in
XagI
)
compsite
(in
Hpy166II
)
charac
(in
BmgI
)
charac
(in
XapI
)
compsite
(in
Hpy178III
)
charac
(in
BmgT120I
)
charac
(in
XbaI
)
compsite
(in
Hpy188I
)
charac
(in
BmiI
)
charac
(in
XceI
)
compsite
(in
Hpy188III
)
charac
(in
BmrFI
)
charac
(in
XcmI
)
compsite
(in
Hpy8I
)
charac
(in
BmrI
)
charac
(in
XhoI
)
compsite
(in
Hpy99I
)
charac
(in
BmsI
)
charac
(in
XhoII
)
compsite
(in
HpyAV
)
charac
(in
BmtI
)
charac
(in
XmaCI
)
compsite
(in
HpyCH4III
)
charac
(in
BmuI
)
charac
(in
XmaI
)
compsite
(in
HpyCH4IV
)
charac
(in
BoxI
)
charac
(in
XmaIII
)
compsite
(in
HpyCH4V
)
charac
(in
BpiI
)
charac
(in
XmaJI
)
compsite
(in
HpyF10VI
)
charac
(in
BplI
)
charac
(in
XmiI
)
compsite
(in
HpyF3I
)
charac
(in
BpmI
)
charac
(in
XmnI
)
compsite
(in
Hsp92I
)
charac
(in
Bpu10I
)
charac
(in
XspI
)
compsite
(in
Hsp92II
)
charac
(in
Bpu1102I
)
charac
(in
ZraI
)
compsite
(in
HspAI
)
charac
(in
Bpu14I
)
charac
(in
ZrmI
)
compsite
(in
ItaI
)
charac
(in
BpuAI
)
charac
(in
Zsp2I
)
compsite
(in
KasI
)
charac
(in
BpuEI
)
characterDataHandler()
(in
DataHandler
)
compsite
(in
KflI
)
charac
(in
BpuMI
)
characteristic()
(in
NoCut
)
compsite
(in
Kpn2I
)
charac
(in
BpvUI
)
characteristic()
(in
OneCut
)
compsite
(in
KpnI
)
charac
(in
Bsa29I
)
characteristic()
(in
TwoCuts
)
compsite
(in
Ksp22I
)
charac
(in
BsaAI
)
characters()
(in
_XMLparser
)
compsite
(in
Ksp632I
)
charac
(in
BsaBI
)
characters()
(in
ContentHandler
)
compsite
(in
KspAI
)
charac
(in
BsaHI
)
characters()
(in
EventGenerator
)
compsite
(in
KspI
)
charac
(in
BsaI
)
CharBuffer
(in
Bio.Nexus.Nexus
)
compsite
(in
Kzo9I
)
charac
(in
BsaJI
)
charged_aas
(in
Bio.SeqUtils.IsoelectricPoint
)
compsite
(in
LguI
)
charac
(in
BsaMI
)
CHARSET
(in
Bio.Nexus.Nexus
)
compsite
(in
LpnI
)
charac
(in
BsaWI
)
CheckSum
(in
Bio.SeqUtils
)
compsite
(in
Lsp1109I
)
charac
(in
BsaXI
)
child_edges()
(in
Graph
)
compsite
(in
LweI
)
charac
(in
BsbI
)
child_edges()
(in
MultiGraph
)
compsite
(in
MabI
)
charac
(in
Bsc4I
)
children()
(in
Graph
)
compsite
(in
MaeI
)
charac
(in
BscAI
)
children()
(in
MultiGraph
)
compsite
(in
MaeII
)
charac
(in
BscGI
)
Chromosome
(in
Bio.Graphics.BasicChromosome
)
compsite
(in
MaeIII
)
charac
(in
Bse118I
)
CHROMOSOME()
(in
_RecordConsumer
)
compsite
(in
MalI
)
charac
(in
Bse1I
)
ChromosomeCounts
(in
Bio.Graphics.DisplayRepresentation
)
compsite
(in
MaqI
)
charac
(in
Bse21I
)
ChromosomeSegment
(in
Bio.Graphics.BasicChromosome
)
compsite
(in
MauBI
)
charac
(in
Bse3DI
)
CircularDrawer
(in
Bio.Graphics.GenomeDiagram._CircularDrawer
)
compsite
(in
MbiI
)
charac
(in
Bse8I
)
circularise()
(in
FormattedSeq
)
compsite
(in
MboI
)
charac
(in
BseAI
)
CjeI
compsite
(in
MboII
)
charac
(in
BseBI
)
CjeNII
compsite
(in
McaTI
)
charac
(in
BseCI
)
CjePI
compsite
(in
McrI
)
charac
(in
BseDI
)
CjuI
compsite
(in
MfeI
)
charac
(in
BseGI
)
CjuII
compsite
(in
MflI
)
charac
(in
BseJI
)
CKEYWORDS
(in
Bio.Sequencing.Phd
)
compsite
(in
MhlI
)
charac
(in
BseLI
)
Cla
(in
Bio.SCOP
)
compsite
(in
MjaIV
)
charac
(in
BseMI
)
Clade
(in
Bio.Phylo.BaseTree
)
compsite
(in
MlsI
)
charac
(in
BseMII
)
clade
(in
Tree
)
compsite
(in
MluI
)
charac
(in
BseNI
)
Clade
(in
Bio.Phylo.Newick
)
compsite
(in
MluNI
)
charac
(in
BsePI
)
Clade
(in
Bio.Phylo.PhyloXML
)
compsite
(in
Mly113I
)
charac
(in
BseRI
)
clade()
(in
Writer
)
compsite
(in
MlyI
)
charac
(in
BseSI
)
clade_relation()
(in
Parser
)
compsite
(in
MmeI
)
charac
(in
BseX3I
)
clade_relation()
(in
Writer
)
compsite
(in
MnlI
)
charac
(in
BseXI
)
CladeRelation
(in
Bio.Phylo.PhyloXML
)
compsite
(in
Mph1103I
)
charac
(in
BseYI
)
ClaI
compsite
(in
MreI
)
charac
(in
BsgI
)
classdict
(in
Bio.Restriction._Update.RestrictionCompiler
)
compsite
(in
MroI
)
charac
(in
Bsh1236I
)
classify()
(in
Bio.LogisticRegression
)
compsite
(in
MroNI
)
charac
(in
Bsh1285I
)
classify()
(in
Bio.MaxEntropy
)
compsite
(in
MroXI
)
charac
(in
BshFI
)
classify()
(in
Bio.NaiveBayes
)
compsite
(in
MscI
)
charac
(in
BshNI
)
classify()
(in
Bio.kNN
)
compsite
(in
MseI
)
charac
(in
BshTI
)
clean()
(in
AlignmentWriter
)
compsite
(in
MslI
)
charac
(in
BshVI
)
clean()
(in
SequenceWriter
)
compsite
(in
Msp20I
)
charac
(in
BsiEI
)
clean_value()
(in
FeatureValueCleaner
)
compsite
(in
MspA1I
)
charac
(in
BsiHKAI
)
clear()
(in
Crystal
)
compsite
(in
MspCI
)
charac
(in
BsiHKCI
)
clear()
(in
_InMemoryIndex
)
compsite
(in
MspI
)
charac
(in
BsiI
)
clear()
(in
_IndexedSeqFileDict
)
compsite
(in
MspR9I
)
charac
(in
BsiSI
)
CLIP
(in
Bio.Affy.CelFile
)
compsite
(in
MssI
)
charac
(in
BsiWI
)
close()
(in
FilteredReader
)
compsite
(in
MstI
)
charac
(in
BsiYI
)
close()
(in
Adaptor
)
compsite
(in
MunI
)
charac
(in
BslFI
)
close()
(in
DBServer
)
compsite
(in
Mva1269I
)
charac
(in
BslI
)
ClustalAlignment
(in
Bio.Clustalw
)
compsite
(in
MvaI
)
charac
(in
BsmAI
)
ClustalIO
(in
Bio.AlignIO
)
compsite
(in
MvnI
)
charac
(in
BsmBI
)
ClustalIterator
(in
Bio.AlignIO.ClustalIO
)
compsite
(in
MvrI
)
charac
(in
BsmFI
)
Clustalw
(in
Bio
)
compsite
(in
MwoI
)
charac
(in
BsmI
)
ClustalwCommandline
(in
Bio.Align.Applications._Clustalw
)
compsite
(in
NaeI
)
charac
(in
BsnI
)
ClustalWriter
(in
Bio.AlignIO.ClustalIO
)
compsite
(in
NarI
)
charac
(in
Bso31I
)
Cluster
(in
Bio
)
compsite
(in
NciI
)
charac
(in
BsoBI
)
clustercentroids()
(in
Record
)
compsite
(in
NcoI
)
charac
(in
Bsp119I
)
clusterdistance()
(in
Record
)
compsite
(in
NdeI
)
charac
(in
Bsp120I
)
Cmodulo
(in
PrintFormat
)
compsite
(in
NdeII
)
charac
(in
Bsp1286I
)
cmp_sccs()
(in
Bio.SCOP
)
compsite
(in
NgoAVIII
)
charac
(in
Bsp13I
)
code()
(in
Writer
)
compsite
(in
NgoMIV
)
charac
(in
Bsp1407I
)
CodonAdaptationIndex
(in
Bio.SeqUtils.CodonUsage
)
compsite
(in
NhaXI
)
charac
(in
Bsp143I
)
CODONPOSITIONS
(in
Bio.Nexus.Nexus
)
compsite
(in
NheI
)
charac
(in
Bsp1720I
)
CodonsDict
(in
Bio.SeqUtils.CodonUsage
)
compsite
(in
NlaCI
)
charac
(in
Bsp19I
)
CodonTable
(in
Bio.Data
)
compsite
(in
NlaIII
)
charac
(in
Bsp24I
)
CodonTable
(in
Bio.Data.CodonTable
)
compsite
(in
NlaIV
)
charac
(in
Bsp68I
)
CodonUsage
(in
Bio.SeqUtils
)
compsite
(in
Nli3877I
)
charac
(in
BspACI
)
CodonUsageIndices
(in
Bio.SeqUtils
)
compsite
(in
NmeAIII
)
charac
(in
BspCNI
)
cofactor()
(in
_RecordConsumer
)
compsite
(in
NmeDI
)
charac
(in
BspD6I
)
collapse()
(in
Chain
)
compsite
(in
NmuCI
)
charac
(in
BspDI
)
collapse()
(in
TreeMixin
)
compsite
(in
NotI
)
charac
(in
BspEI
)
collapse_all()
(in
TreeMixin
)
compsite
(in
NruI
)
charac
(in
BspFNI
)
collapse_genera()
(in
Tree
)
compsite
(in
NsbI
)
charac
(in
BspGI
)
collectRules()
(in
GenericParser
)
compsite
(in
NsiI
)
charac
(in
BspHI
)
color
(in
Clade
)
compsite
(in
NspBII
)
charac
(in
BspLI
)
color()
(in
Parser
)
compsite
(in
NspI
)
charac
(in
BspLU11I
)
color()
(in
Writer
)
compsite
(in
NspV
)
charac
(in
BspMI
)
color_names
(in
BranchColor
)
compsite
(in
OliI
)
charac
(in
BspMII
)
ColorTranslator
(in
Bio.Graphics.GenomeDiagram._Colors
)
compsite
(in
PabI
)
charac
(in
BspNCI
)
Cols()
(in
CelConsumer
)
compsite
(in
PacI
)
charac
(in
BspOI
)
ColumnUnit
(in
Bio.Wise.psw
)
compsite
(in
PaeI
)
charac
(in
BspPI
)
combine()
(in
Bio.Nexus.Nexus
)
compsite
(in
PaeR7I
)
charac
(in
BspQI
)
command_line()
(in
AlignAceConsumer
)
compsite
(in
PagI
)
charac
(in
BspT104I
)
command_line()
(in
AlignAceConsumer
)
compsite
(in
PalAI
)
charac
(in
BspT107I
)
Commandline
(in
Bio.Nexus.Nexus
)
compsite
(in
PasI
)
charac
(in
BspTI
)
comment()
(in
_RecordConsumer
)
compsite
(in
PauI
)
charac
(in
BspTNI
)
comment()
(in
_FeatureConsumer
)
compsite
(in
PceI
)
charac
(in
BspXI
)
comment()
(in
_RecordConsumer
)
compsite
(in
PciI
)
charac
(in
BsrBI
)
comment()
(in
_RecordConsumer
)
compsite
(in
PciSI
)
charac
(in
BsrDI
)
comment()
(in
_RecordConsumer
)
compsite
(in
PctI
)
charac
(in
BsrFI
)
comment()
(in
_SequenceConsumer
)
compsite
(in
PdiI
)
charac
(in
BsrGI
)
Commercially_available
compsite
(in
PdmI
)
charac
(in
BsrI
)
commit()
(in
Adaptor
)
compsite
(in
PfeI
)
charac
(in
BsrSI
)
commit()
(in
DBServer
)
compsite
(in
Pfl1108I
)
charac
(in
BssAI
)
common_ancestor()
(in
Tree
)
compsite
(in
Pfl23II
)
charac
(in
BssECI
)
common_ancestor()
(in
TreeMixin
)
compsite
(in
PflFI
)
charac
(in
BssHII
)
common_name()
(in
Writer
)
compsite
(in
PflMI
)
charac
(in
BssKI
)
CommOnly
(in
Bio.Restriction
)
compsite
(in
PfoI
)
charac
(in
BssMI
)
CommOnly
(in
Bio.Restriction.Restriction
)
compsite
(in
PhoI
)
charac
(in
BssNAI
)
CommOnly
(in
Bio.Restriction._Update.RestrictionCompiler
)
compsite
(in
PinAI
)
charac
(in
BssNI
)
Comparative
(in
Bio.Graphics
)
compsite
(in
PlaDI
)
charac
(in
BssSI
)
ComparativeScatterPlot
(in
Bio.Graphics.Comparative
)
compsite
(in
Ple19I
)
charac
(in
BssT1I
)
compare_motifs()
(in
MEMEMotif
)
compsite
(in
PleI
)
charac
(in
Bst1107I
)
CompareAce()
(in
Bio.AlignAce.CompareAceStandalone
)
compsite
(in
PmaCI
)
charac
(in
Bst2BI
)
CompareAceCommandline
(in
Bio.AlignAce.Applications
)
compsite
(in
PmeI
)
charac
(in
Bst2UI
)
CompareAceCommandline
(in
Bio.Motif.Applications._AlignAce
)
compsite
(in
PmlI
)
charac
(in
Bst4CI
)
CompareAceConsumer
(in
Bio.AlignAce.Parser
)
compsite
(in
PpiI
)
charac
(in
Bst6I
)
CompareAceConsumer
(in
Bio.Motif.Parsers.AlignAce
)
compsite
(in
PpsI
)
charac
(in
Bst98I
)
CompareAceParser
(in
Bio.AlignAce.Parser
)
compsite
(in
Ppu10I
)
charac
(in
BstACI
)
CompareAceParser
(in
Bio.Motif.Parsers.AlignAce
)
compsite
(in
Ppu21I
)
charac
(in
BstAFI
)
CompareAceScanner
(in
Bio.AlignAce.Scanner
)
compsite
(in
PpuMI
)
charac
(in
BstAPI
)
CompareAceScanner
(in
Bio.Motif.Parsers.AlignAce
)
compsite
(in
PscI
)
charac
(in
BstAUI
)
CompareAceStandalone
(in
Bio.AlignAce
)
compsite
(in
PshAI
)
charac
(in
BstBAI
)
Compass
(in
Bio
)
compsite
(in
PshBI
)
charac
(in
BstBI
)
compatible_end()
(in
Blunt
)
compsite
(in
PsiI
)
charac
(in
BstC8I
)
compatible_end()
(in
Ov3
)
compsite
(in
Psp03I
)
charac
(in
BstDEI
)
compatible_end()
(in
Ov5
)
compsite
(in
Psp124BI
)
charac
(in
BstDSI
)
compatible_end()
(in
Unknown
)
compsite
(in
Psp1406I
)
charac
(in
BstEII
)
compile()
(in
Bio.Prosite.Pattern
)
compsite
(in
Psp5II
)
charac
(in
BstENI
)
complement()
(in
Bio.Restriction.DNAUtils
)
compsite
(in
Psp6I
)
charac
(in
BstF5I
)
complement()
(in
MutableSeq
)
compsite
(in
PspCI
)
charac
(in
BstFNI
)
complement()
(in
Seq
)
compsite
(in
PspEI
)
charac
(in
BstH2I
)
complement()
(in
UnknownSeq
)
compsite
(in
PspGI
)
charac
(in
BstHHI
)
complement_alphabet
(in
Bio.Restriction._Update.RestrictionCompiler
)
compsite
(in
PspLI
)
charac
(in
BstKTI
)
Compound
(in
Bio.KEGG
)
compsite
(in
PspN4I
)
charac
(in
BstMAI
)
compsite
(in
AanI
)
compsite
(in
PspOMI
)
charac
(in
BstMBI
)
compsite
(in
AarI
)
compsite
(in
PspOMII
)
charac
(in
BstMCI
)
compsite
(in
AasI
)
compsite
(in
PspPI
)
charac
(in
BstMWI
)
compsite
(in
AatI
)
compsite
(in
PspPPI
)
charac
(in
BstNI
)
compsite
(in
AatII
)
compsite
(in
PspPRI
)
charac
(in
BstNSI
)
compsite
(in
AbsI
)
compsite
(in
PspXI
)
charac
(in
BstOI
)
compsite
(in
Acc16I
)
compsite
(in
PsrI
)
charac
(in
BstPAI
)
compsite
(in
Acc36I
)
compsite
(in
PssI
)
charac
(in
BstPI
)
compsite
(in
Acc65I
)
compsite
(in
PstI
)
charac
(in
BstSCI
)
compsite
(in
AccB1I
)
compsite
(in
PsuI
)
charac
(in
BstSFI
)
compsite
(in
AccB7I
)
compsite
(in
PsyI
)
charac
(in
BstSLI
)
compsite
(in
AccBSI
)
compsite
(in
PteI
)
charac
(in
BstSNI
)
compsite
(in
AccI
)
compsite
(in
PvuI
)
charac
(in
BstUI
)
compsite
(in
AccII
)
compsite
(in
PvuII
)
charac
(in
BstV1I
)
compsite
(in
AccIII
)
compsite
(in
RcaI
)
charac
(in
BstV2I
)
compsite
(in
AceIII
)
compsite
(in
RceI
)
charac
(in
BstX2I
)
compsite
(in
AciI
)
compsite
(in
RgaI
)
charac
(in
BstXI
)
compsite
(in
AclI
)
compsite
(in
RigI
)
charac
(in
BstYI
)
compsite
(in
AclWI
)
compsite
(in
RleAI
)
charac
(in
BstZ17I
)
compsite
(in
AcoI
)
compsite
(in
RpaB5I
)
charac
(in
BstZI
)
compsite
(in
AcsI
)
compsite
(in
RruI
)
charac
(in
Bsu15I
)
compsite
(in
AcuI
)
compsite
(in
RsaI
)
charac
(in
Bsu36I
)
compsite
(in
AcvI
)
compsite
(in
RsaNI
)
charac
(in
BsuRI
)
compsite
(in
AcyI
)
compsite
(in
RseI
)
charac
(in
BsuTUI
)
compsite
(in
AdeI
)
compsite
(in
Rsr2I
)
charac
(in
BtgI
)
compsite
(in
AfaI
)
compsite
(in
RsrII
)
charac
(in
BtgZI
)
compsite
(in
AfeI
)
compsite
(in
SacI
)
charac
(in
BthCI
)
compsite
(in
AfiI
)
compsite
(in
SacII
)
charac
(in
BtrI
)
compsite
(in
AflII
)
compsite
(in
SalI
)
charac
(in
BtsCI
)
compsite
(in
AflIII
)
compsite
(in
SanDI
)
charac
(in
BtsI
)
compsite
(in
AgeI
)
compsite
(in
SapI
)
charac
(in
BtuMI
)
compsite
(in
AgsI
)
compsite
(in
SaqAI
)
charac
(in
BveI
)
compsite
(in
AhaIII
)
compsite
(in
SatI
)
charac
(in
Cac8I
)
compsite
(in
AhdI
)
compsite
(in
Sau3AI
)
charac
(in
CaiI
)
compsite
(in
AhlI
)
compsite
(in
Sau96I
)
charac
(in
CauII
)
compsite
(in
AjiI
)
compsite
(in
SauI
)
charac
(in
CciI
)
compsite
(in
AjnI
)
compsite
(in
SbfI
)
charac
(in
CciNI
)
compsite
(in
AjuI
)
compsite
(in
ScaI
)
charac
(in
CdiI
)
compsite
(in
AleI
)
compsite
(in
SchI
)
charac
(in
CdpI
)
compsite
(in
AlfI
)
compsite
(in
SciI
)
charac
(in
CelII
)
compsite
(in
AloI
)
compsite
(in
ScrFI
)
charac
(in
CfoI
)
compsite
(in
AluBI
)
compsite
(in
SdaI
)
charac
(in
Cfr10I
)
compsite
(in
AluI
)
compsite
(in
SdeAI
)
charac
(in
Cfr13I
)
compsite
(in
Alw21I
)
compsite
(in
SdeOSI
)
charac
(in
Cfr42I
)
compsite
(in
Alw26I
)
compsite
(in
SduI
)
charac
(in
Cfr9I
)
compsite
(in
Alw44I
)
compsite
(in
SecI
)
charac
(in
CfrI
)
compsite
(in
AlwFI
)
compsite
(in
SelI
)
charac
(in
ChaI
)
compsite
(in
AlwI
)
compsite
(in
SetI
)
charac
(in
CjeI
)
compsite
(in
AlwNI
)
compsite
(in
SexAI
)
charac
(in
CjeNII
)
compsite
(in
Ama87I
)
compsite
(in
SfaAI
)
charac
(in
CjePI
)
compsite
(in
Aor13HI
)
compsite
(in
SfaNI
)
charac
(in
CjuI
)
compsite
(in
Aor51HI
)
compsite
(in
SfcI
)
charac
(in
CjuII
)
compsite
(in
ApaBI
)
compsite
(in
SfeI
)
charac
(in
ClaI
)
compsite
(in
ApaI
)
compsite
(in
SfiI
)
charac
(in
CpoI
)
compsite
(in
ApaLI
)
compsite
(in
SfoI
)
charac
(in
CseI
)
compsite
(in
ApeKI
)
compsite
(in
Sfr274I
)
charac
(in
CsiI
)
compsite
(in
ApoI
)
compsite
(in
Sfr303I
)
charac
(in
Csp45I
)
compsite
(in
ApyPI
)
compsite
(in
SfuI
)
charac
(in
Csp6I
)
compsite
(in
AquII
)
compsite
(in
SgfI
)
charac
(in
CspAI
)
compsite
(in
AquIII
)
compsite
(in
SgrAI
)
charac
(in
CspCI
)
compsite
(in
AquIV
)
compsite
(in
SgrBI
)
charac
(in
CspI
)
compsite
(in
ArsI
)
compsite
(in
SgrDI
)
charac
(in
CstMI
)
compsite
(in
AscI
)
compsite
(in
SgsI
)
charac
(in
CviAII
)
compsite
(in
AseI
)
compsite
(in
SimI
)
charac
(in
CviJI
)
compsite
(in
Asi256I
)
compsite
(in
SinI
)
charac
(in
CviKI_1
)
compsite
(in
AsiGI
)
compsite
(in
SlaI
)
charac
(in
CviQI
)
compsite
(in
AsiSI
)
compsite
(in
SmaI
)
charac
(in
CviRI
)
compsite
(in
Asp700I
)
compsite
(in
SmiI
)
charac
(in
DdeI
)
compsite
(in
Asp718I
)
compsite
(in
SmiMI
)
charac
(in
DinI
)
compsite
(in
AspA2I
)
compsite
(in
SmlI
)
charac
(in
DpnI
)
compsite
(in
AspCNI
)
compsite
(in
SmoI
)
charac
(in
DpnII
)
compsite
(in
AspEI
)
compsite
(in
SmuI
)
charac
(in
DraI
)
compsite
(in
AspI
)
compsite
(in
SnaBI
)
charac
(in
DraII
)
compsite
(in
AspLEI
)
compsite
(in
SnaI
)
charac
(in
DraIII
)
compsite
(in
AspS9I
)
compsite
(in
SpeI
)
charac
(in
DraRI
)
compsite
(in
AssI
)
compsite
(in
SphI
)
charac
(in
DrdI
)
compsite
(in
AsuC2I
)
compsite
(in
SplI
)
charac
(in
DrdII
)
compsite
(in
AsuHPI
)
compsite
(in
SpoDI
)
charac
(in
DrdIV
)
compsite
(in
AsuI
)
compsite
(in
SrfI
)
charac
(in
DriI
)
compsite
(in
AsuII
)
compsite
(in
Sse232I
)
charac
(in
DsaI
)
compsite
(in
AsuNHI
)
compsite
(in
Sse8387I
)
charac
(in
DseDI
)
compsite
(in
AvaI
)
compsite
(in
Sse8647I
)
charac
(in
EaeI
)
compsite
(in
AvaII
)
compsite
(in
Sse9I
)
charac
(in
EagI
)
compsite
(in
AvaIII
)
compsite
(in
SseBI
)
charac
(in
Eam1104I
)
compsite
(in
AviII
)
compsite
(in
SsiI
)
charac
(in
Eam1105I
)
compsite
(in
AvrII
)
compsite
(in
SspD5I
)
charac
(in
EarI
)
compsite
(in
AxyI
)
compsite
(in
SspDI
)
charac
(in
EciI
)
compsite
(in
BaeGI
)
compsite
(in
SspI
)
charac
(in
Ecl136II
)
compsite
(in
BaeI
)
compsite
(in
SstI
)
charac
(in
EclXI
)
compsite
(in
BalI
)
compsite
(in
SstII
)
charac
(in
Eco105I
)
compsite
(in
BamHI
)
compsite
(in
Sth132I
)
charac
(in
Eco130I
)
compsite
(in
BanI
)
compsite
(in
Sth302II
)
charac
(in
Eco147I
)
compsite
(in
BanII
)
compsite
(in
StrI
)
charac
(in
Eco24I
)
compsite
(in
BanIII
)
compsite
(in
StsI
)
charac
(in
Eco31I
)
compsite
(in
BarI
)
compsite
(in
StuI
)
charac
(in
Eco32I
)
compsite
(in
BasI
)
compsite
(in
StyD4I
)
charac
(in
Eco47I
)
compsite
(in
BauI
)
compsite
(in
StyI
)
charac
(in
Eco47III
)
compsite
(in
BbeI
)
compsite
(in
SwaI
)
charac
(in
Eco52I
)
compsite
(in
Bbr7I
)
compsite
(in
TaaI
)
charac
(in
Eco53kI
)
compsite
(in
BbrPI
)
compsite
(in
TaiI
)
charac
(in
Eco57I
)
compsite
(in
BbsI
)
compsite
(in
TaqI
)
charac
(in
Eco57MI
)
compsite
(in
BbuI
)
compsite
(in
TaqII
)
charac
(in
Eco72I
)
compsite
(in
Bbv12I
)
compsite
(in
TatI
)
charac
(in
Eco81I
)
compsite
(in
BbvCI
)
compsite
(in
TauI
)
charac
(in
Eco88I
)
compsite
(in
BbvI
)
compsite
(in
TfiI
)
charac
(in
Eco91I
)
compsite
(in
BbvII
)
compsite
(in
TliI
)
charac
(in
EcoHI
)
compsite
(in
BccI
)
compsite
(in
Tru1I
)
charac
(in
EcoICRI
)
compsite
(in
Bce83I
)
compsite
(in
Tru9I
)
charac
(in
EcoNI
)
compsite
(in
BceAI
)
compsite
(in
TscAI
)
charac
(in
EcoO109I
)
compsite
(in
BcefI
)
compsite
(in
TseI
)
charac
(in
EcoO65I
)
compsite
(in
BcgI
)
compsite
(in
TsoI
)
charac
(in
EcoRI
)
compsite
(in
BciVI
)
compsite
(in
Tsp45I
)
charac
(in
EcoRII
)
compsite
(in
BclI
)
compsite
(in
Tsp4CI
)
charac
(in
EcoRV
)
compsite
(in
BcnI
)
compsite
(in
Tsp509I
)
charac
(in
EcoT14I
)
compsite
(in
BcuI
)
compsite
(in
TspDTI
)
charac
(in
EcoT22I
)
compsite
(in
BdaI
)
compsite
(in
TspEI
)
charac
(in
EcoT38I
)
compsite
(in
BetI
)
compsite
(in
TspGWI
)
charac
(in
EgeI
)
compsite
(in
BfaI
)
compsite
(in
TspMI
)
charac
(in
EheI
)
compsite
(in
BfiI
)
compsite
(in
TspRI
)
charac
(in
ErhI
)
compsite
(in
BfmI
)
compsite
(in
TssI
)
charac
(in
EsaBC3I
)
compsite
(in
BfoI
)
compsite
(in
TstI
)
charac
(in
EsaSSI
)
compsite
(in
BfrI
)
compsite
(in
TsuI
)
charac
(in
Esp3I
)
compsite
(in
BfuAI
)
compsite
(in
Tth111I
)
charac
(in
EspI
)
compsite
(in
BfuCI
)
compsite
(in
Tth111II
)
charac
(in
FaeI
)
compsite
(in
BfuI
)
compsite
(in
UbaF11I
)
charac
(in
FaiI
)
compsite
(in
BglI
)
compsite
(in
UbaF12I
)
charac
(in
FalI
)
compsite
(in
BglII
)
compsite
(in
UbaF13I
)
charac
(in
FaqI
)
compsite
(in
BinI
)
compsite
(in
UbaF14I
)
charac
(in
FatI
)
compsite
(in
BisI
)
compsite
(in
UbaF9I
)
charac
(in
FauI
)
compsite
(in
BlnI
)
compsite
(in
UbaPI
)
charac
(in
FauNDI
)
compsite
(in
BlpI
)
compsite
(in
UnbI
)
charac
(in
FbaI
)
compsite
(in
BlsI
)
compsite
(in
Van91I
)
charac
(in
FblI
)
compsite
(in
BmcAI
)
compsite
(in
Vha464I
)
charac
(in
FinI
)
compsite
(in
Bme1390I
)
compsite
(in
VneI
)
charac
(in
FmuI
)
compsite
(in
Bme18I
)
compsite
(in
VpaK11AI
)
charac
(in
Fnu4HI
)
compsite
(in
BmeRI
)
compsite
(in
VpaK11BI
)
charac
(in
FnuDII
)
compsite
(in
BmeT110I
)
compsite
(in
VspI
)
charac
(in
FokI
)
compsite
(in
BmgBI
)
compsite
(in
XagI
)
charac
(in
FriOI
)
compsite
(in
BmgI
)
compsite
(in
XapI
)
charac
(in
FseI
)
compsite
(in
BmgT120I
)
compsite
(in
XbaI
)
charac
(in
Fsp4HI
)
compsite
(in
BmiI
)
compsite
(in
XceI
)
charac
(in
FspAI
)
compsite
(in
BmrFI
)
compsite
(in
XcmI
)
charac
(in
FspBI
)
compsite
(in
BmrI
)
compsite
(in
XhoI
)
charac
(in
FspI
)
compsite
(in
BmsI
)
compsite
(in
XhoII
)
charac
(in
GdiII
)
compsite
(in
BmtI
)
compsite
(in
XmaCI
)
charac
(in
GlaI
)
compsite
(in
BmuI
)
compsite
(in
XmaI
)
charac
(in
GluI
)
compsite
(in
BoxI
)
compsite
(in
XmaIII
)
charac
(in
GsaI
)
compsite
(in
BpiI
)
compsite
(in
XmaJI
)
charac
(in
GsuI
)
compsite
(in
BplI
)
compsite
(in
XmiI
)
charac
(in
HaeI
)
compsite
(in
BpmI
)
compsite
(in
XmnI
)
charac
(in
HaeII
)
compsite
(in
Bpu10I
)
compsite
(in
XspI
)
charac
(in
HaeIII
)
compsite
(in
Bpu1102I
)
compsite
(in
ZraI
)
charac
(in
HapII
)
compsite
(in
Bpu14I
)
compsite
(in
ZrmI
)
charac
(in
HgaI
)
compsite
(in
BpuAI
)
compsite
(in
Zsp2I
)
charac
(in
HgiAI
)
compsite
(in
BpuEI
)
confidence
(in
Clade
)
charac
(in
HgiCI
)
compsite
(in
BpuMI
)
Confidence
(in
Bio.Phylo.PhyloXML
)
charac
(in
HgiEII
)
compsite
(in
BpvUI
)
confidence
(in
Phylogeny
)
charac
(in
HgiJII
)
compsite
(in
Bsa29I
)
confidence()
(in
Parser
)
charac
(in
HhaI
)
compsite
(in
BsaAI
)
confidence()
(in
Writer
)
charac
(in
Hin1I
)
compsite
(in
BsaBI
)
conj
(in
Bio.Affy.CelFile
)
charac
(in
Hin1II
)
compsite
(in
BsaHI
)
conjugate
(in
Bio.Affy.CelFile
)
charac
(in
Hin4I
)
compsite
(in
BsaI
)
connection
(in
Bio.DocSQL
)
charac
(in
Hin4II
)
compsite
(in
BsaJI
)
Connection
(in
Bio.GFF
)
charac
(in
Hin6I
)
compsite
(in
BsaMI
)
ConnectionError
(in
Bio.Restriction._Update.Update
)
charac
(in
HinP1I
)
compsite
(in
BsaWI
)
consensus()
(in
Motif
)
charac
(in
HincII
)
compsite
(in
BsaXI
)
consensus()
(in
Bio.Nexus.Trees
)
charac
(in
HindII
)
compsite
(in
BsbI
)
ConsoleWidth
(in
PrintFormat
)
charac
(in
HindIII
)
compsite
(in
Bsc4I
)
ConsoleWidth
(in
Bio.Restriction.RanaConfig
)
charac
(in
HinfI
)
compsite
(in
BscAI
)
ConsoleWidth
(in
Bio.Restriction.Restriction
)
charac
(in
HpaI
)
compsite
(in
BscGI
)
ConsoleWidth
(in
Bio.Restriction._Update.Update
)
charac
(in
HpaII
)
compsite
(in
Bse118I
)
consrtm()
(in
_FeatureConsumer
)
charac
(in
HphI
)
compsite
(in
Bse1I
)
consrtm()
(in
_RecordConsumer
)
charac
(in
Hpy166II
)
compsite
(in
Bse21I
)
constant()
(in
Nexus
)
charac
(in
Hpy178III
)
compsite
(in
Bse3DI
)
contains()
(in
Alphabet
)
charac
(in
Hpy188I
)
compsite
(in
Bse8I
)
contains()
(in
AlphabetEncoder
)
charac
(in
Hpy188III
)
compsite
(in
BseAI
)
contains()
(in
Gapped
)
charac
(in
Hpy8I
)
compsite
(in
BseBI
)
contains()
(in
HasStopCodon
)
charac
(in
Hpy99I
)
compsite
(in
BseCI
)
contains()
(in
HashSet
)
charac
(in
HpyAV
)
compsite
(in
BseDI
)
ContentHandler
(in
Bio.ExPASy.ScanProsite
)
charac
(in
HpyCH4III
)
compsite
(in
BseGI
)
contents()
(in
Bio.listfns
)
charac
(in
HpyCH4IV
)
compsite
(in
BseJI
)
Contig
(in
Bio.Sequencing.Ace
)
charac
(in
HpyCH4V
)
compsite
(in
BseLI
)
contig_location()
(in
_FeatureConsumer
)
charac
(in
HpyF10VI
)
compsite
(in
BseMI
)
contig_location()
(in
_RecordConsumer
)
charac
(in
HpyF3I
)
compsite
(in
BseMII
)
Controller
(in
Bio.PopGen.FDist
)
charac
(in
Hsp92I
)
compsite
(in
BseNI
)
Controller
(in
Bio.PopGen.GenePop
)
charac
(in
Hsp92II
)
compsite
(in
BsePI
)
Controller
(in
Bio.PopGen.SimCoal
)
charac
(in
HspAI
)
compsite
(in
BseRI
)
converged()
(in
_DescriptionConsumer
)
charac
(in
ItaI
)
compsite
(in
BseSI
)
ConversionMutation
(in
Bio.GA.Mutation.Simple
)
charac
(in
KasI
)
compsite
(in
BseX3I
)
convert()
(in
Bio.AlignIO
)
charac
(in
KflI
)
compsite
(in
BseXI
)
convert()
(in
Bio.Phylo._io
)
charac
(in
Kpn2I
)
compsite
(in
BseYI
)
convert()
(in
Bio.SeqIO
)
charac
(in
KpnI
)
compsite
(in
BsgI
)
convert_absolute_support()
(in
Tree
)
charac
(in
Ksp22I
)
compsite
(in
Bsh1236I
)
convert_genepop_to_fdist()
(in
Bio.PopGen.FDist.Utils
)
charac
(in
Ksp632I
)
compsite
(in
Bsh1285I
)
copy()
(in
Crystal
)
charac
(in
KspAI
)
compsite
(in
BshFI
)
copy()
(in
Organism
)
charac
(in
KspI
)
compsite
(in
BshNI
)
copy()
(in
Vector
)
charac
(in
Kzo9I
)
compsite
(in
BshTI
)
copy()
(in
PrositeTerm
)
charac
(in
LguI
)
compsite
(in
BshVI
)
copy()
(in
_IndexedSeqFileDict
)
charac
(in
LpnI
)
compsite
(in
BsiEI
)
copysign
(in
Bio.Affy.CelFile
)
charac
(in
Lsp1109I
)
compsite
(in
BsiHKAI
)
CorruptedXMLError
(in
Bio.Entrez.Parser
)
charac
(in
LweI
)
compsite
(in
BsiHKCI
)
cos
(in
Bio.Affy.CelFile
)
charac
(in
MabI
)
compsite
(in
BsiI
)
cosh
(in
Bio.Affy.CelFile
)
charac
(in
MaeI
)
compsite
(in
BsiSI
)
COUNT
(in
Bio.SubsMat.FreqTable
)
charac
(in
MaeII
)
compsite
(in
BsiWI
)
count()
(in
Chain
)
charac
(in
MaeIII
)
compsite
(in
BsiYI
)
count()
(in
PatternRepository
)
charac
(in
MalI
)
compsite
(in
BslFI
)
count()
(in
MutableSeq
)
charac
(in
MaqI
)
compsite
(in
BslI
)
count()
(in
Seq
)
charac
(in
MauBI
)
compsite
(in
BsmAI
)
count()
(in
UnknownSeq
)
charac
(in
MbiI
)
compsite
(in
BsmBI
)
count()
(in
Bio.listfns
)
charac
(in
MboI
)
compsite
(in
BsmFI
)
count_amino_acids()
(in
ProteinAnalysis
)
charac
(in
MboII
)
compsite
(in
BsmI
)
count_monomers()
(in
Bio.utils
)
charac
(in
McaTI
)
compsite
(in
BsnI
)
count_terminals()
(in
Tree
)
charac
(in
McrI
)
compsite
(in
Bso31I
)
count_terminals()
(in
TreeMixin
)
charac
(in
MfeI
)
compsite
(in
BsoBI
)
CpoI
charac
(in
MflI
)
compsite
(in
Bsp119I
)
crc32()
(in
Bio.SeqUtils.CheckSum
)
charac
(in
MhlI
)
compsite
(in
Bsp120I
)
crc64()
(in
Bio.SeqUtils.CheckSum
)
charac
(in
MjaIV
)
compsite
(in
Bsp1286I
)
Create
(in
Bio.DocSQL
)
charac
(in
MlsI
)
compsite
(in
Bsp13I
)
create_contingency_tables()
(in
GenePopController
)
charac
(in
MluI
)
compsite
(in
Bsp1407I
)
CreateDict
(in
Bio.PropertyManager
)
charac
(in
MluNI
)
compsite
(in
Bsp143I
)
crop_matrix()
(in
Nexus
)
charac
(in
Mly113I
)
compsite
(in
Bsp1720I
)
Crossover
(in
Bio.GA
)
charac
(in
MlyI
)
compsite
(in
Bsp19I
)
Crystal
(in
Bio
)
charac
(in
MmeI
)
compsite
(in
Bsp24I
)
Crystal
(in
Bio.Crystal
)
charac
(in
MnlI
)
compsite
(in
Bsp68I
)
CrystalError
(in
Bio.Crystal
)
charac
(in
Mph1103I
)
compsite
(in
BspACI
)
CseI
charac
(in
MreI
)
compsite
(in
BspCNI
)
CsiI
charac
(in
MroI
)
compsite
(in
BspD6I
)
Csp45I
charac
(in
MroNI
)
compsite
(in
BspDI
)
Csp6I
charac
(in
MroXI
)
compsite
(in
BspEI
)
CspAI
charac
(in
MscI
)
compsite
(in
BspFNI
)
CspCI
charac
(in
MseI
)
compsite
(in
BspGI
)
CspI
charac
(in
MslI
)
compsite
(in
BspHI
)
cstatus()
(in
Nexus
)
charac
(in
Msp20I
)
compsite
(in
BspLI
)
CstMI
charac
(in
MspA1I
)
compsite
(in
BspLU11I
)
ct
(in
Bio.Sequencing.Ace
)
charac
(in
MspCI
)
compsite
(in
BspMI
)
current_suppliers()
(in
RestrictionBatch
)
charac
(in
MspI
)
compsite
(in
BspMII
)
cursor()
(in
Query
)
charac
(in
MspR9I
)
compsite
(in
BspNCI
)
cursor()
(in
QuerySingle
)
charac
(in
MssI
)
compsite
(in
BspOI
)
cut_once()
(in
NoCut
)
charac
(in
MstI
)
compsite
(in
BspPI
)
cut_once()
(in
OneCut
)
charac
(in
MunI
)
compsite
(in
BspQI
)
cut_once()
(in
TwoCuts
)
charac
(in
Mva1269I
)
compsite
(in
BspT104I
)
cut_twice()
(in
NoCut
)
charac
(in
MvaI
)
compsite
(in
BspT107I
)
cut_twice()
(in
OneCut
)
charac
(in
MvnI
)
compsite
(in
BspTI
)
cut_twice()
(in
TwoCuts
)
charac
(in
MvrI
)
compsite
(in
BspTNI
)
CviAII
charac
(in
MwoI
)
compsite
(in
BspXI
)
CviJI
charac
(in
NaeI
)
compsite
(in
BsrBI
)
CviKI_1
charac
(in
NarI
)
compsite
(in
BsrDI
)
CviQI
charac
(in
NciI
)
compsite
(in
BsrFI
)
CviRI
charac
(in
NcoI
)
compsite
(in
BsrGI
)
Trees
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